Infectious Disease Modeling

Conduct research and develop software in support of infectious disease modeling and operational forecasting initiaves. Principle investigator on several contracts and R&D initiatives to generate near-term forecasts of COVID-19 and influenza targets.


. Automated Infectious Disease Forecasting: Use-cases and Practical Considerations for Pipeline Implementation. Poster presented at epiDAMIK workshop Washington DC, 2022.


. Evaluation of individual and ensemble probabilistic forecasts of COVID-19 mortality in the United States. PNAS, 2022.

Project Project

. epiflows: an R package for risk assessment of travel-related spread of disease. F1000 Research, 2019.

PDF Project Project

. epicontacts: Handling, visualisation and analysis of epidemiological contacts. F1000 Research, 2018.

PDF Project Project Project